The detailed information of tRNA gene sequence


Sequence ID>FU090900317
Genome IDCR382131
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrE
Start position on genome 1017744
End posion on genome 1017652
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ggtctgataaggtcgaataagtaatttcattgctggaaaaattttcaaaatcacattttcattctcaaaactaacaaaggctgccctagcaaacatctga
tRNA gene sequence 
GACTGCGTGGCCAAGTTGGTTAAGGCGTACGACTGTTAATCGTAAGATCGAGAGTTCGAC
CCTCTCCGCGGTCGtct
Downstream region at tRNA end position 
tttttggatacccaggcgcccgccattgtttttgcctgtgtgtgtgtgtatctctctcatggcttttttttggcaggtactcattttgtttacctttcaa
Secondary structure (Cloverleaf model)
>FU090900317	Asn	GTT
                   a      Gtct tttttggatacccaggcgcccgccattgtttttgcctgtgtgtgtgtgtatctctctcatggcttttttttggcaggtactcattttgtttacctttcaa
                     G - C
                     A - T
                     C - G
                     T + G
                     G - C
                     C - G
                     G - C          C C
                    T     C T C T C     A
      T G A        G      | | | | |     G
    T       A C C G       G A G A G     C
    G         | | |                 T T
    G       A G G C
      T T A        G     AGATC
                    T - A
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A *
                    G T T
intron: position=38, length=19 (in A-loop)
GAAACATTCGGGTTCTGAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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