The detailed information of tRNA gene sequence


Sequence ID>SC0100018
Genome IDNC_001135
Search identical group
Phylum/ClassAscomycota
SpeciesSaccharomyces cerevisiae S288c
Chromosome chr3
Start position on genome 168368
End posion on genome 168297
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tatctcatgttgttcgttttgttataaggttgtttcatatgtgttttatgaacgtttaggatgacgtattgtcatactgacatacctcattttgagatacaaaatattacaagaagtcct
tRNA gene sequence 
GGTCCTATAGTGTAGTGGTTATCACTTTCGGTTTTGATCCGGACAACCCCGGTTCGAATC
CGGGTAGGACCTttt
Downstream region at tRNA end position 
ttttttgaatacagatttatttttttgatttttcactatcttcagatacagaagaacgctactggtggtttctctataagtattaacaagacgcttctgccaggtttaatatctaacaat
Secondary structure (Cloverleaf model)
>SC0100018	Gln	TTG
                   t      Tttt ttttttgaatacagatttatttttttgatttttcactatcttcagatacagaagaacgctactggtggtttctctataagtattaacaagacgcttctgccaggtttaatatctaacaat
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     G G G C C     A
      T G A        A      | | | | |     G
    G       T G T G       C C C G G     C
    G         | | |                 T T
    T       T C A C
      T A          T     CAAC
                    T - A
                    T + G
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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