The detailed information of tRNA gene sequence


Sequence ID>SC0100036
Genome IDNC_001136
Search identical group
Phylum/ClassAscomycota
SpeciesSaccharomyces cerevisiae S288c
Chromosome chr4
Start position on genome 1075541
End posion on genome 1075467
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agtgtgatgaaaacgacaggaagtaactataagaagcagtaaagttgagacttgctgcaccatttttattgccacacctttattagttctttatgaatcctaagctgtcatccgtaatat
tRNA gene sequence 
GTTCCAATAGTGTAGCGGCTATCACGTTGCCTTCACACGGCAAAGGTCCCGAGTTCGATC
CTCGGTTGGAACATtt
Downstream region at tRNA end position 
ttgttttttcactactactatatttttagttgaatcctaggccacatttaattgactaatagacttaagatcgagattagtaatcttctgacttttttctactgtgtaattgttgaatga
Secondary structure (Cloverleaf model)
>SC0100036	Val	CAC
                   t      ATtt ttgttttttcactactactatatttttagttgaatcctaggccacatttaattgactaatagacttaagatcgagattagtaatcttctgacttttttctactgtgtaattgttgaatga
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     A - T
                     A - T          C T
                    T     G G C T C     A
      C G A        A      | | | | |     G
    G       T G T G       C C G A G     C
    G         | | |                 T T
    C       T C A C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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