The detailed information of tRNA gene sequence


Sequence ID>SC0100102
Genome IDNC_001140
Search identical group
Phylum/ClassAscomycota
SpeciesSaccharomyces cerevisiae S288c
Chromosome chr8
Start position on genome 116174
End posion on genome 116102
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
cccaagtatgtaattattttttgcaaatctttcctcagtaacgataacgacacgaaggtaatattttaaaacatttatcaacaagtcactaaatataatctgggtcctatcactattaga
tRNA gene sequence 
GCTTCTATGGCCAAGTTGGTAAGGCGCCACACTAGTAATGTGGAGATCATCGGTTCAAAT
CCGATTGGAAGCAttt
Downstream region at tRNA end position 
ttttttgcattgatttcccaattcgtagctgatgatcaccctctgaagctatcggacattttttttctttaattttttcagcgagagagctggcagtgaacgtacaagagcaagctctct
Secondary structure (Cloverleaf model)
>SC0100102	Thr	AGT
                   a      Attt ttttttgcattgatttcccaattcgtagctgatgatcaccctctgaagctatcggacattttttttctttaattttttcagcgagagagctggcagtgaacgtacaagagcaagctctct
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     T + G
                     A - T          T A
                    T     T A G C C     A
      T G A        G      | | | | |     A
    T       A C C G       A T C G G     C
    G         | | |                 T T
    G       A G G C
      T A          G     AGATC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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