The detailed information of tRNA gene sequence


Sequence ID>SC0100110
Genome IDNC_001141
Search identical group
Phylum/ClassAscomycota
SpeciesSaccharomyces cerevisiae S288c
Chromosome chr9
Start position on genome 336417
End posion on genome 336346
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acttatttcaacaaatgatacgttttaaactgctagttatcaacacttttctaccagattctcattatattttaaaaaaacatatactatacaaataaacgaaattttcatagaaacaaa
tRNA gene sequence 
TCCGTGATAGTTTAATGGTCAGAATGGGCGCTTGTCGCGTGCCAGATCGGGGTTCAATTC
CCCGTCGCGGAGatt
Downstream region at tRNA end position 
atttttttaccataactgatgactacagttggtgaaacggtagcgagtaaatatgaaactagacagcaaaagttgaccatagataatgaattaaaagctgtaaatcctgggtacaaatcg
Secondary structure (Cloverleaf model)
>SC0100110	Asp	GTC
                   a      Gatt atttttttaccataactgatgactacagttggtgaaacggtagcgagtaaatatgaaactagacagcaaaagttgaccatagataatgaattaaaagctgtaaatcctgggtacaaatcg
                     T - A
                     C - G
                     C - G
                     G - C
                     T + G
                     G - C
                     A - T          T T
                    T     G C C C C     A
      T A A        A      | | | | |     A
    G       T T T G       C G G G G     C
    G       + | | +                 T T
    T       G A A T
      C A          G     AGAT
                    G - C
                    G - C
                    C - G
                    G + T
                    C - G
                  T       C
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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