The detailed information of tRNA gene sequence


Sequence ID>SC0100131
Genome IDNC_001142
Search identical group
Phylum/ClassAscomycota
SpeciesSaccharomyces cerevisiae S288c
Chromosome chr10
Start position on genome 116006
End posion on genome 115935
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaaacaactagtacagaacagttgagtttagagccggtgtctattatcatatgggaaagatgatcctcttgttaatttggtaagtagtactattaggtgttgaatattaaccgtttataa
tRNA gene sequence 
TCCGATATAGTGTAACGGCTATCACATCACGCTTTCACCGTGGAGACCGGGGTTCGACTC
CCCGTATCGGAGtat
Downstream region at tRNA end position 
tattttttatgtgattagctaaatagttattttttgaaatagtttgtagtagttcacctttatcctattaaaatataatatcacacgaaaattatctgtttgtcctcaattcagttgatc
Secondary structure (Cloverleaf model)
>SC0100131	Glu	TTC
                   a      Gtat tattttttatgtgattagctaaatagttattttttgaaatagtttgtagtagttcacctttatcctattaaaatataatatcacacgaaaattatctgtttgtcctcaattcagttgatc
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T C
                    T     G C C C C     A
      C A A        A      | | | | |     G
    G       T G T G       C G G G G     C
    G         | | |                 T T
    C       T C A C
      T A          A     AGAC
                    T + G
                    C - G
                    A - T
                    C - G
                    G - C
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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