The detailed information of tRNA gene sequence


Sequence ID>SC0100200
Genome IDNC_001148
Search identical group
Phylum/ClassAscomycota
SpeciesSaccharomyces cerevisiae S288c
Chromosome chr16
Start position on genome 689562
End posion on genome 689643
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttagtgtccctagctagaattacttctgctagtgaaacactcatcatcaatataaggaaattaattttagtcagatgtttttaataccttccgttttctaacactaccagattattttg
tRNA gene sequence 
GGCACTATGGCCGAGTGGTTAAGGCGACAGACTTGAAATCTGTTGGGCTCTGCCCGCGCT
GGTTCAAATCCTGCTGGTGTCGtat
Downstream region at tRNA end position 
tattattttttgaaattatttttcaataaccaccatgtcagcaccaggttcttttacaattatacaaacacacatatctcaaaatcactcaagaggtcatggaccaatatggcaacttgc
Secondary structure (Cloverleaf model)
>SC0100200	Ser	TGA
                   g      Gtat tattattttttgaaattatttttcaataaccaccatgtcagcaccaggttcttttacaattatacaaacacacatatctcaaaatcactcaagaggtcatggaccaatatggcaacttgc
                     G - C
                     G + T
                     C - G
                     A - T
                     C - G
                     T + G
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | |   | |     A
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGCTCTGCCCGC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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