The detailed information of tRNA gene sequence


Sequence ID>SC0800005
Genome IDNC_001139
Search identical group
Phylum/ClassAscomycota
SpeciesSaccharomyces cerevisiae S288c
Chromosome chr7
Start position on genome 115492
End posion on genome 115587
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
atttgttgcaataaatgataagtagtttaccgtccattaacatgtgcattaaataatagcattatgtgaacataatgtatatttaactaaaactattatcgaagaaatccgaagaactca
tRNA gene sequence 
TCCTTGTTAGCTCAGTTGGTAGAGCGTTCGGCTTTTAACCGAAATGTCAGGGGTTCGAGC
CCCCTATGAGGAGttc
Downstream region at tRNA end position 
ttcttctttatttttttcccggttcactatttttccaagattaaacatggctcatatacaccatccaaaaatctcttaattaacctataaccattgttctccttcacctcattcaagaat
Secondary structure (Cloverleaf model)
>SC0800005	Lys	TTT
                   a      Gttc ttcttctttatttttttcccggttcactatttttccaagattaaacatggctcatatacaccatccaaaaatctcttaattaacctataaccattgttctccttcacctcattcaagaat
                     T - A
                     C - G
                     C - G
                     T - A
                     T + G
                     G + T
                     T - A          C G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    T T T
intron: position=38, length=23 (in A-loop)
AGCGCATTTGCTTAAGCAAGGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK