The detailed information of tRNA gene sequence


Sequence ID>SC0800013
Genome IDNC_001144
Search identical group
Phylum/ClassAscomycota
SpeciesSaccharomyces cerevisiae S288c
Chromosome chr12
Start position on genome 732091
End posion on genome 732193
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ttagtagatgatagttgatttttattccaacactaagaaataatttcgccatttcttgaatgtatttaaagatatttaatgctataatagacatttaaatccaattcttccaacatacaa
tRNA gene sequence 
GGGAGTTTGGCCGAGTGGTTTAAGGCGTCAGATTTAGGCTCTGATATCTTCGGATGCAAG
GGTTCGAATCCCTTAGCTCTCATta
Downstream region at tRNA end position 
tattttttgctttttctcttgaggtcacatgatcgcaaaatggcaaatggcacgtgaagctgtcgatattggggaactgtggtggttggcaaatgactaattaagttagtcaaggcgcca
Secondary structure (Cloverleaf model)
>SC0800013	Leu	TAG
                   a      ATta tattttttgctttttctcttgaggtcacatgatcgcaaaatggcaaatggcacgtgaagctgtcgatattggggaactgtggtggttggcaaatgactaattaagttagtcaaggcgcca
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATCTTCGGATGC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C *
                  T       G
                    T A G
intron: position=39, length=19 (in A-loop)
TGGATTTAACCTCTAAAAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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