The detailed information of tRNA gene sequence


Sequence ID>W2110396231
Genome IDJADYVM010000022
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesEnsifer sp. NBAIM29 [JADYVM]
Start position on genome 5500
End posion on genome 5404
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tggcatttcA
tRNA gene sequence 
GGAGGAGATTCATGCCCGGTGGCATGTCCGGACTTCAAATCCGGGAGGGGCCGAGAGACG
GTCCTTGGTGGGTTCGACCCCCACTCTCTTCCGCC
Downstream region at tRNA end position 
Attatcggac
Secondary structure (Cloverleaf model)
>W2110396231	SeC	TCA
                   A      CGCC Attatcggac
                     G - C
                     G + T
                     A - T
                     G - C
                     G + T
                     A   C
                     G + T          C C
                    A     C A C C C     A
      C C G        T      | | | | |     G
    C       T A C T       G T G G G     C
    G             +                 T T
    G       C A T G
      T G G        T     GAGGGGCCGAGAGACGGTCCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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