The detailed information of tRNA gene sequence


Sequence ID>SC0900051
Genome IDNC_001136
Search identical group
Phylum/ClassAscomycota
SpeciesSaccharomyces cerevisiae S288c
Chromosome chr4
Start position on genome 884358
End posion on genome 884490
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
atcccgacaattttcccaaaattcaaagaattctcagaaagagctatttttttttttaataaaattattagtactaattccagtataaataacaatgttatttacgtctctttcgaaaat
tRNA gene sequence 
GCTCGTGTAGCTCAGTGGTTAGAGCTTCGTGCTTATAACGCGACCGTCGTGGGTTCAAAC
CCCACCTCGAGCActt
Downstream region at tRNA end position 
ctttctctttttttttcacacgcgtttgcaacatgcccgtattacatgagcttatttgactttagatggttttcagttcttttttttttttttttttttttcagtagattaatgcgaaga
Secondary structure (Cloverleaf model)
>SC0900051	Ile	TAT
                   t      Actt ctttctctttttttttcacacgcgtttgcaacatgcccgtattacatgagcttatttgactttagatggttttcagttcttttttttttttttttttttttcagtagattaatgcgaaga
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     T   T
                     G - C          C A
                    T     C A C C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     CCGTC
                    T - A
                    C - G
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A *
                    T A T
intron: position=38, length=60 (in A-loop)
GCAACATTCGGTTTCCGAAGTTTCTGTGCCAAAGACCTTTCAAACAGGCCTTTAAAAGCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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