The detailed information of tRNA gene sequence


Sequence ID>SC0900065
Genome IDNC_001142
Search identical group
Phylum/ClassAscomycota
SpeciesSaccharomyces cerevisiae S288c
Chromosome chr10
Start position on genome 543037
End posion on genome 542949
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cccttagctttagtataaatttcactctgaaccatcttggaaggaccggataattatttgaaatctctttttcaattgtatatgtgttatgtagtatactctttcttcaacaattaaata
tRNA gene sequence 
CTCTCGGTAGCCAAGTTGGTTTAAGGCGCAAGACTGTAAATCTTGAGATCGGGCGTTCGA
CTCGCCCCCGGGAGAttt
Downstream region at tRNA end position 
tttttttgttttttatgtctccattcacttcccagacttgcaagttgaaatatttctttcaagctcttaacgaagagttattatcaaattgtgacatattcctttacacaatacggagat
Secondary structure (Cloverleaf model)
>SC0900065	Tyr	GTA
                   a      Attt tttttttgttttttatgtctccattcacttcccagacttgcaagttgaaatatttctttcaagctcttaacgaagagttattatcaaattgtgacatattcctttacacaatacggagat
                     C - G
                     T - A
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T C
                    T     C C C G C     A
    T T G A        A      | | | | |     G
  G         A C C G       G G G C G     C
  G           | | |                 T T
  T         A G G C
    T T A          G     AGATC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A *
                    G T A
intron: position=38, length=14 (in A-loop)
TTTATCACTACGAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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