The detailed information of tRNA gene sequence


Sequence ID>SC0900071
Genome IDNC_001144
Search identical group
Phylum/ClassAscomycota
SpeciesSaccharomyces cerevisiae S288c
Chromosome chr12
Start position on genome 605434
End posion on genome 605302
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
agctaacttatcagtggtagtactgttgaacgaaacaagccggaactcaaaagggtaatttcgtgaaaaacaatcatctacggtataaataacaatttaatttacgtctctttcgaaaat
tRNA gene sequence 
GCTCGTGTAGCTCAGTGGTTAGAGCTTCGTGCTTATAACGCGACCGTCGTGGGTTCAATC
CCCACCTCGAGCActt
Downstream region at tRNA end position 
ctttctcttttttttttaaaaaaagttgcattatttctatcaactgttgtagctacgttacacctaattttgtattgtagactgttagataatccacatatacaggtaaatacggcacat
Secondary structure (Cloverleaf model)
>SC0900071	Ile	TAT
                   t      Actt ctttctcttttttttttaaaaaaagttgcattatttctatcaactgttgtagctacgttacacctaattttgtattgtagactgttagataatccacatatacaggtaaatacggcacat
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     T   T
                     G - C          C T
                    T     C A C C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     CCGTC
                    T - A
                    C - G
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A *
                    T A T
intron: position=38, length=60 (in A-loop)
GCAACATTCGGTTTCCGAAGTTTCTGTGCCAAAGACCTTTCAAACAGGCCTTTAAAAGCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK