The detailed information of tRNA gene sequence


Sequence ID>FG091100023
Genome IDAE016817
Search identical group
Phylum/ClassAscomycota
SpeciesAshbya gossypii ATCC 10895
Chromosome chr4
Start position on genome 1265934
End posion on genome 1266008
Amino Acid Ala
Anticodon AGC
Upstream region at tRNA start position 
ccttgtggccatgcttcagggcgctcagggcaccttggttctgaccgcgtagttacagtcgtgatacatatactacatactaacagataccatcaatacT
tRNA gene sequence 
GGGCGTGTGGCGTAGTTGGTAGCGCGCTCCCTTAGCATGGGAGAGGTCATCGGTTCGATT
CCGGTCTCGTCCAAtt
Downstream region at tRNA end position 
ctttttaatagtcgctggttcgattctaactcatttaaattctatttttgaagagtcaggcaaaggatgcactcctgcattcttgggaccagaaggtata
Secondary structure (Cloverleaf model)
>FG091100023	Ala	AGC
                   T      AAtt ctttttaatagtcgctggttcgattctaactcatttaaattctatttttgaagagtcaggcaaaggatgcactcctgcattcttgggaccagaaggtata
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     T   T
                     G - C          T T
                    T     T G G C C     A
      T G A        G      | + | | |     G
    T       T G C G       A T C G G     C
    G       + | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       T
                  T       A
                    A G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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