The detailed information of tRNA gene sequence


Sequence ID>FG091100079
Genome IDCP000496
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome chr2
Start position on genome 1404599
End posion on genome 1404515
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aataaacctttgtattagaaattaatcacgtgcgatagatcacgtgaaagcgtgattatacaactagctgtagatgggaactcttgaggtgcattaacaT
tRNA gene sequence 
GGAGGGTTGGCCGAGTGGTCTAAGGCGGCAGACTTAAGATCTGCTGGACGATGTCCGCGC
GAGTTCGAACCTCGCATCCTTCATta
Downstream region at tRNA end position 
tttttttgataagtgagtacgctttttgcaatcgcaacttaagttactttgtatgtacaattgtctcatttttcgaatcaatgtctatatatataagtac
Secondary structure (Cloverleaf model)
>FG091100079	Leu	TAA
                   T      ATta tttttttgataagtgagtacgctttttgcaatcgcaacttaagttactttgtatgtacaattgtctcatttttcgaatcaatgtctatatatataagtac
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C
                     G + T
                     T - A          C A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G A G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGGACGATGTCCGC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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