The detailed information of tRNA gene sequence


Sequence ID>FG091100081
Genome IDCP000496
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome chr2
Start position on genome 1188314
End posion on genome 1188242
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tgaatattaactattgcggcactgatgttttggcagcggcactgatgtaaaaaaataaacacagttagcggaaaaatgcgtactcttgagttacaaacat
tRNA gene sequence 
GCCCTGCTGGCCAAACGGTTAAGGCATCCGCCTCCTAAGCGGGAGACTCCGGGTTCGAGT
CCCGGGTAGGGTTtta
Downstream region at tRNA end position 
agcgtgaacaattaatttttgtaattttttgattccaagctaagatgacaaggaaaacattctctcgtcgacagttgaaagatttcagtgataatattgt
Secondary structure (Cloverleaf model)
>FG091100081	Arg	CCT
                   t      Ttta agcgtgaacaattaatttttgtaattttttgattccaagctaagatgacaaggaaaacattctctcgtcgacagttgaaagatttcagtgataatattgt
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G + T
                     C - G          T G
                    T     G G C C C     A
      C A A        G      | | | | |     G
    G       A C C G       C C G G G     C
    G         | | |                 T T
    T       A G G C
      T A          A     AGACT
                    T + G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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