The detailed information of tRNA gene sequence


Sequence ID>W2110423485
Genome IDJAEKJU010000016
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSalipiger thiooxidans SY-1-11 [JAEKJU]
Start position on genome 50376
End posion on genome 50300
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cctcacaagt
tRNA gene sequence 
CGGGCTATAGCGCAGCCTGGTAGCGCGTCCGTCTGGGGGACGGAAGGTCGCAGGTTCGAG
TCCTGCTAGCCCGACCA
Downstream region at tRNA end position 
tttactctcg
Secondary structure (Cloverleaf model)
>W2110423485	Pro	GGG
                   t      ACCA tttactctcg
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     C G T C C     A
      C G A        A      | | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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