The detailed information of tRNA gene sequence


Sequence ID>FG091800001
Genome IDAE016817
Search identical group
Phylum/ClassAscomycota
SpeciesAshbya gossypii ATCC 10895
Chromosome chr4
Start position on genome 645305
End posion on genome 645403
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
acttgatccttgcgtttgtttggtctataacctttaattgggtagtgcttatggaaatatatataatgagatattacatgggtcccatataacttccgtT
tRNA gene sequence 
GAGAGTTTGGCCGAGTGGTTTAAGGCGTCAGATTTAGGCTCTGATATCTACGGATTCGCG
GGTTCGAATCCCGTAGCTCTCATta
Downstream region at tRNA end position 
ttttttgtatattgtctttctcaggcatgtgacattttgcatcataatcataccgaagatatggctcccaccgtgacctgatacattctcgcatctgaag
Secondary structure (Cloverleaf model)
>FG091800001	Leu	TAG
                   T      ATta ttttttgtatattgtctttctcaggcatgtgacattttgcatcataatcataccgaagatatggctcccaccgtgacctgatacattctcgcatctgaag
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATCTACGGATTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G *
                    T A G
intron: position=38, length=15 (in A-loop)
TTATTCTCCTAAAAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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