The detailed information of tRNA gene sequence


Sequence ID>FG091800008
Genome IDAE017341
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr1
Start position on genome 1511516
End posion on genome 1511605
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
aatataaccctcctacagtatttagagacagttggcggcagaaatgctcacagaggattgaatgcctaataatcatacacaaaagagtgtgtactgttga
tRNA gene sequence 
TTCCCGTTAACTCAGTGGTCAGAGTAGTGTGCTTATGTCACACCGGTCGTGGGTTCAACT
CCCACACGGGAAAttt
Downstream region at tRNA end position 
ctttttgcgccacatcacatttcagatctccttggacaacgactgtccgctcggcagctgacgtcactttccgcttccggcgatatcgcgtcgcagatcg
Secondary structure (Cloverleaf model)
>FG091800008	Ile	TAT
                   a      Attt ctttttgcgccacatcacatttcagatctccttggacaacgactgtccgctcggcagctgacgtcactttccgcttccggcgatatcgcgtcgcagatcg
                     T - A
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     C A C C C     A
      T G A        A      | | | | |     A
    G       C T C A       G T G G G     C
    G       | | | |                 T T
    T       G A G T
      C A          A     CGGTC
                    G - C
                    T - A
                    G - C
                    T - A
                    G - C
                  C       T
                  T       G *
                    T A T
intron: position=38, length=17 (in A-loop)
AGGATACAGTTTTATTT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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