The detailed information of tRNA gene sequence


Sequence ID>FG091800013
Genome IDAE017342
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr2
Start position on genome 924355
End posion on genome 924246
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aattgcgattctacgatgaccacactgaggatgacctaaactgacaatgcggtatctttgatagcttataatgaatctactaagcggggcaaacaatcca
tRNA gene sequence 
AGAGCGATCGGATAGTGGTTATTCCGCCACATTGCTAATGTGGTGCCTTCGGGCTCGGGA
GTTCGAATCTCCCTCGTTCTGttt
Downstream region at tRNA end position 
tcttttttttctcctttggttttcgtaaaacgtttctcatcaatttttttccccaagtcacaaaagattagtcattcagcagaagagttatgataaacga
Secondary structure (Cloverleaf model)
>FG091800013	Ser	GCT
                   a      Gttt tcttttttttctcctttggttttcgtaaaacgtttctcatcaatttttttccccaagtcacaaaagattagtcattcagcagaagagttatgataaacga
                     A - T
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     A - T          T A
                    T     C C C T C     A
      T G A        C      | | | | |     G
    G       T A G G       G G G A G     C
    G         | | |                 T T
    T       T T C C
      T A          G     TGCCTTCGGGCTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A *
                    G C T
intron: position=38, length=29 (in A-loop)
TTGTTCTTGCTCTTTTACGTAAGCGATTT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK