Sequence ID | >FG091800014 |
Genome ID | AE017342 |
Phylum/Class | Basidiomycota |
Species | Cryptococcus neoformans var. neoformans JEC21 |
Chromosome
|
chr2
|
Start position on genome
|
1542184
|
End posion on genome
|
1542088
|
Amino Acid
|
Glu
|
Anticodon
|
CTC
|
Upstream region at tRNA start position
|
gagacgcagggcgaaggatggataggcaaaacgatttttactcagttcaaccgttcacgttgcttgatgtatttatgaaattcaaccattcaaaatggaa
|
tRNA gene sequence
|
TCTTCATTAGTATAACGGTTAGTATAACCGCTTCTCACGCGGTAGACCAGGGTTCAACTC CCTGATGGAGAAtta
|
Downstream region at tRNA end position
|
ctttttgttgacagttagcttgtggtgaattttttactttttaaccaccctcgttgcgcttgtctttcacattttttcccttggtcgtgggcccattgca
|
Secondary structure (Cloverleaf model) | >FG091800014 Glu CTC
a Atta ctttttgttgacagttagcttgtggtgaattttttactttttaaccaccctcgttgcgcttgtctttcacattttttcccttggtcgtgggcccattgca
T - A
C - G
T - A
T + G
C - G
A - T
T - A T C
T G T C C C A
C A A A | | | | | A
G T A T G C A G G G C
G + | | + T T
T G T A T
T A A AGAC
A - T
C - G
C - G
G - C
C - G
T C
T A *
C T C
intron: position=38, length=25 (in A-loop)
GTAATTGGAATTATCCGGTTCTGTT
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |