The detailed information of tRNA gene sequence


Sequence ID>FG091800016
Genome IDAE017344
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr4
Start position on genome 772440
End posion on genome 772532
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
catgtaaatgcaccatacactcctttcgataacacactgtctctaattatgagaacaattaggatatgtatatatatcattgcaatggaaacccaataag
tRNA gene sequence 
CTCTCCGTAGTTTAGTGTGGTTTAGAGCGTCAGACTGTAAATCTGAAAGTCGTGCGTTCG
ACTCGCACCGGGGAGAttt
Downstream region at tRNA end position 
tttttggacattgtccagatatctgcaaacctgctgcaaagctgcgatctgacgcgatcaagtcttgttttaattttgcctgatcatgcaagatcaagtt
Secondary structure (Cloverleaf model)
>FG091800016	Tyr	GTA
                   g      Attt tttttggacattgtccagatatctgcaaacctgctgcaaagctgcgatctgacgcgatcaagtcttgttttaattttgcctgatcatgcaagatcaagtt
                     C - G
                     T - A
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T C
                    T     C A C G C     A
    G T G A        A      | | | | |     G
  T         T T T G       G T G C G     C
  G         + | + |                 T T
  G         G A G C
    T T T A        G     AAGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A *
                    G T A
intron: position=38, length=17 (in A-loop)
TTGGTTAACAACTTCAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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