The detailed information of tRNA gene sequence


Sequence ID>FG091800062
Genome IDCR382132
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrF
Start position on genome 3730131
End posion on genome 3730228
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttttattctaatgattaaaagttgttgtttttttttattctagcgtcacgtgatcaattactgggggttataatgatttaacgctcccgagcctcacca
tRNA gene sequence 
GGCAATTTGTCCGAGTGGTTAAGGAGTTTGACTTGAAATCAAATGCGGTTTCCGCGCGTA
GGTTCGAGTCCTGCAATTGTCGata
Downstream region at tRNA end position 
tgtttttggagttgttggaaacttctttttttggtgtttatcgtacgtacagtacagtacatgctgtacatgacaatgcagccaattcttctattttgat
Secondary structure (Cloverleaf model)
>FG091800062	Ser	TGA
                   a      Gata tgtttttggagttgttggaaacttctttttttggtgtttatcgtacgtacagtacagtacatgctgtacatgacaatgcagccaattcttctattttgat
                     G - C
                     G + T
                     C - G
                     A - T
                     A - T
                     T - A
                     T - A          T G
                    T     C G T C C     A
      T G A        G      | + | | |     G
    G       G C C T       G T A G G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGCGGTTTCCGCGC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A *
                    T G A
intron: position=38, length=16 (in A-loop)
TTGAACTATTCTAGTT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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