The detailed information of tRNA gene sequence


Sequence ID>FG091900167
Genome IDAE016817
Search identical group
Phylum/ClassAscomycota
SpeciesAshbya gossypii ATCC 10895
Chromosome chr4
Start position on genome 1280805
End posion on genome 1280570
Amino Acid Pseudo
Anticodon CAG
Upstream region at tRNA start position 
ctgtcttcctccatagacctcaatcctttttggtgggggctcaaaaaccgcatgcgcgatattatggaaatctaaagactgtatatcacaatccaatcaa
tRNA gene sequence 
GGGTGTGTGGCCGAGTGGTTAAGGCGCCTGCGTCAGGTGCAGGTCTGATTAGTTATCAGG
CGCGAGTTCGAATCTCGCCACATCCAtta
Downstream region at tRNA end position 
ttttttgccgtcagttcggtgtcacgtgacagcagccaacgacgagagggcagcggcccgggtcgagtgggggacatggattgatctgaacaaaggcttc
Secondary structure (Cloverleaf model)
>FG091900167	Pseudo	CAG
                   a      Atta ttttttgccgtcagttcggtgtcacgtgacagcagccaacgacgagagggcagcggcccgggtcgagtgggggacatggattgatctgaacaaaggcttc
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C
                     T - A
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G A G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TCTGATTAGTTATCAGGC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  G       T
                  T       G *
                    C A G
intron: position=38, length=150 (in A-loop)
GAGCTTAGGGCCGCATTCACGACTGGAGTGCACCAAATTGGGTGGCGGGCCAAGAACCGCCCAGCATTCG
CCAGCGTGAAGCCTCTGAGTGATAATATCACTCCGGACGAGAAGCGGATTTGGTCCCTTCTAGTCCGGGG
TTCTCGACCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK