The detailed information of tRNA gene sequence


Sequence ID>FG091900176
Genome IDAE016819
Search identical group
Phylum/ClassAscomycota
SpeciesAshbya gossypii ATCC 10895
Chromosome chr6
Start position on genome 1590152
End posion on genome 1590063
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aaggttccccaagactatttgcacaaaagtaatcccatgtaaaataataactggcctcatatgacgggacgtgctcacacaaaaattcggtagaaactcg
tRNA gene sequence 
TCCTTGTTAGCTCAGTTGGTAGAGCGTTCGGCTTTTAACCGAAATGTCACGGGTTCGAGC
CCCGTATGAGGAGttt
Downstream region at tRNA end position 
ctttcaattttNNttgtgtacgctttaccttattttttcaaatccttgcttgttttggacccgaagaacaattgcgttatgtgaaaatagactgcgctaa
Secondary structure (Cloverleaf model)
>FG091900176	Lys	TTT
                   g      Gttt ctttcaattttNNttgtgtacgctttaccttattttttcaaatccttgcttgttttggacccgaagaacaattgcgttatgtgaaaatagactgcgctaa
                     T - A
                     C - G
                     C - G
                     T - A
                     T + G
                     G + T
                     T - A          C G
                    T     T G C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    T T T
intron: position=38, length=17 (in A-loop)
CGTACAGCTTACGAGGT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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