Sequence ID | >FG091900191 |
Genome ID | AE017341 |
Phylum/Class | Basidiomycota |
Species | Cryptococcus neoformans var. neoformans JEC21 |
Chromosome
|
chr1
|
Start position on genome
|
594060
|
End posion on genome
|
594154
|
Amino Acid
|
Ser
|
Anticodon
|
AGA
|
Upstream region at tRNA start position
|
tgacctagaaataagagaatctttctgctgtaaaatatactctgcacttgttgattaatcatattgactactgaaagccttgctcttcaataccgcatat
|
tRNA gene sequence
|
GGAGTAGTGCGACAGTGGTTACTCGGTTCGATTAGAAATCGAATGCCGTCAGGCGCGCAG GTTCGAGTCCTGCCTGCTCCTttt
|
Downstream region at tRNA end position
|
tttccctttttcgactcatgctttaaaatttgtcatttttgaatagccgtctctatggagaagcccacgatcctcaagctgatgctgtacaagattatcc
|
Secondary structure (Cloverleaf model) | >FG091900191 Ser AGA
t Tttt tttccctttttcgactcatgctttaaaatttgtcatttttgaatagccgtctctatggagaagcccacgatcctcaagctgatgctgtacaagattatcc
G - C
G - C
A - T
G - C
T + G
A - T
G - C T G
T C G T C C A
T G A G | | | | | G
G C A G C G C A G G C
G | | | T T
T C T C G
T A G TGCCGTCAGGCGC
T - A
T - A
C - G
G - C
A - T
T A
T A *
A G A
intron: position=38, length=14 (in A-loop)
TTTTGAAATTCCTC
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |