The detailed information of tRNA gene sequence


Sequence ID>FG091900203
Genome IDAE017344
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr4
Start position on genome 1277557
End posion on genome 1277654
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cgtggtcaaaggaggataatgttgcaaaccagcacaacgcatgaagcgaattattttatttatcgactatgaataatgtgtcagaaagcatttcaaccat
tRNA gene sequence 
TGCCCCGTGGCTGAGTTGGTTACAGCGGTTGACTGTTAATCAGACGGTCCAGAGTTCGAG
TCTCTGCGGGGCAGttt
Downstream region at tRNA end position 
ctttttgcatgtgttttttgcgtttttcagttgtcactcgtcagtactcgagtagtaacaactcgtacttttttttggcgttcgtttgtggcgtggtaga
Secondary structure (Cloverleaf model)
>FG091900203	Asn	GTT
                   t      Gttt ctttttgcatgtgttttttgcgtttttcagttgtcactcgtcagtactcgagtagtaacaactcgtacttttttttggcgttcgtttgtggcgtggtaga
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G T C T C     A
      T G A        G      | | | | |     G
    T       G T C G       C A G A G     C
    G       | | | |                 T T
    G       C A G C
      T T A        G     CGGTC
                    G   A
                    T + G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A *
                    G T T
intron: position=38, length=24 (in A-loop)
GTTAATAATTAATTATCACTAATA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK