The detailed information of tRNA gene sequence


Sequence ID>FG091900209
Genome IDAE017346
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr6
Start position on genome 1126736
End posion on genome 1126826
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aataaaaacaggtagaggcgagcatggcagtaatactcgtactgtttttgttagacacaactgggaacataatatggttttatgtatgacggacatcaaa
tRNA gene sequence 
GCCTTCGTAGCTGAGTTGGTTACAGCGTCCGACTTTTAATCGGGCGATCACGGGTTCGAG
CCCCGTCGAAGGCTaag
Downstream region at tRNA end position 
atacaacatttctttttgtcttttttgcgtctccccatactgtgctgcgcgtttatctatatttgtaactgttcttactgcaaagtttacctagcggttt
Secondary structure (Cloverleaf model)
>FG091900209	Lys	TTT
                   a      Taag atacaacatttctttttgtcttttttgcgtctccccatactgtgctgcgcgtttatctatatttgtaactgttcttactgcaaagtttacctagcggttt
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     C - G
                     G - C          C G
                    T     T G C C C     A
      T G A        A      | | | | |     G
    T       G T C G       A C G G G     C
    G       | | | |                 T T
    G       C A G C
      T T A        G     CGATC
                    T + G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A *
                    T T T
intron: position=38, length=17 (in A-loop)
AGCTTTCACAAGCTTAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK