The detailed information of tRNA gene sequence


Sequence ID>FG091900215
Genome IDAE017348
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr8
Start position on genome 1016920
End posion on genome 1017028
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cagacggccgccaactgcgtcggtgcgtgaacgaaaccgccgaagttgccgagagagtccacacgaggtgacatggtatgattattttacgtaattcgtt
tRNA gene sequence 
GGACAGATGCCCGAGCGGTTAAGGGGACGGTCTCAAGATCCGTTGCGTAAGCGCGTGAGT
TCGAATCTCACTCTGTTCAttt
Downstream region at tRNA end position 
attttttttacctttgactgctacttcggcgcccttatgacgatctataaataatcaaatcccttgcgacaacctttcgacggtcactttaaattatcga
Secondary structure (Cloverleaf model)
>FG091900215	Leu	CAA
                   t      Attt attttttttacctttgactgctacttcggcgcccttatgacgatctataaataatcaaatcccttgcgacaacctttcgacggtcactttaaattatcga
                     G - C
                     G + T
                     A - T
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C C       G T G A G     C
    G         | | |                 T T
    T       A G G G
      T A          G     TGCGTAAGCGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T   T
                  C       A
                  T       G *
                    C A A
intron: position=38, length=30 (in A-loop)
TGGAATACACTTTCCCTGATAAGGGTTGAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK