The detailed information of tRNA gene sequence


Sequence ID>FG091900217
Genome IDCP000496
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome chr2
Start position on genome 1323377
End posion on genome 1323472
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
gattataacctttgaaagatccttaattattgcggcatggatgttttgttgattttatttgcagtaggggcggctaaaagcaatttttcaacaagcttcg
tRNA gene sequence 
TTCCTCATGGCCCAATGGTCAAGGCGTCTGGCTACGAACCAGAAGATTCCAGGTTCGACT
CCTGGTGGGGAAGctt
Downstream region at tRNA end position 
tctttttgtatttctgaatatacaaacagattatttttaatattttggcacttggaatagcaattacgtaaaagcactaattacagaaatgctttatcta
Secondary structure (Cloverleaf model)
>FG091900217	Arg	ACG
                   g      Gctt tctttttgtatttctgaatatacaaacagattatttttaatattttggcacttggaatagcaattacgtaaaagcactaattacagaaatgctttatcta
                     T - A
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T          T C
                    T     G G T C C     A
      T A A        G      | | | | |     G
    G       C C C G       C C A G G     C
    G         | | |                 T T
    T       A G G C
      C A          G     AGATT
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A *
                    A C G
intron: position=38, length=23 (in A-loop)
TTACGTAACCACTTCCGGTTGGA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK