The detailed information of tRNA gene sequence


Sequence ID>W2110459969
Genome IDJAFBDI010000031
Search identical group
Phylum/ClassThermotogota
SpeciesMarinitoga litoralis DSM 21709 [JAFBDI]
Start position on genome 18546
End posion on genome 18456
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attaaattat
tRNA gene sequence 
GGAGGTGTGTTCCGAATTGGCTAAGGAGCCGGTCTCGAAAACCGGTGAGGATTATATCCT
CGTGTGGGTTCGAATCCCACCACCTCCGCCA
Downstream region at tRNA end position 
ttttatattt
Secondary structure (Cloverleaf model)
>W2110459969	Ser	CGA
                   t      GCCA ttttatattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A C C C     A
    T A A G        G      | | | | |     G
  T         C C T T       G T G G G     C
  G           | + |                 T T
  G         A G G A
    C T A          G     TGAGGATTATATCCTCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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