The detailed information of tRNA gene sequence


Sequence ID>FG091900280
Genome IDCR382127
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrA
Start position on genome 473295
End posion on genome 473204
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atcaactcaactaaaataatctcaggacacgtgatgcaccctccagggttggattccaaaaatccatcacgtgcactatgggcgcgtttcgtggccgagt
tRNA gene sequence 
GGCAACTTGCCGGAGTGGTTAACGGGACAGATTCGAAATCTGTTGGGCTTTGCCCGCGCA
GGTTCGAATCCTGCAGTTGTCGatt
Downstream region at tRNA end position 
tttttggcatttcaaaatccgattcctggcggttttgagaatggatctttgcgtgaggctcttttttgcccaattacctatgactgcttgctccagaaaa
Secondary structure (Cloverleaf model)
>FG091900280	Ser	CGA
                   t      Gatt tttttggcatttcaaaatccgattcctggcggttttgagaatggatctttgcgtgaggctcttttttgcccaattacctatgactgcttgctccagaaaa
                     G - C
                     G + T
                     C - G
                     A - T
                     A - T
                     C - G
                     T - A          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G G C C       G C A G G     C
    G         | | |                 T T
    T       A C G G
      T A          G     TGGGCTTTGCCCGC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A *
                    C G A
intron: position=38, length=10 (in A-loop)
TAACCGTACT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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