The detailed information of tRNA gene sequence


Sequence ID>FG091900303
Genome IDCR382132
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrF
Start position on genome 3449637
End posion on genome 3449529
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
actcgtgtctgcagtccataatatcgtcaaaatcacagttcagttttagtcagcaaatgacccatggcagtggccagatttctcaaaaacgtaaaaatct
tRNA gene sequence 
GTCAATTTGGCCGAGTGGTCTAAGGCGTCCGACTCAAGTTCGGATCTCGCAAGAGGCGAG
GGTTCGAATCCCTCAGTTGACAttt
Downstream region at tRNA end position 
gtatgcagactaaggtacgagtactacaaaagctttttattggtgcttgttttttcataaaatttttttttttgttttgacgtctattacaaccctgccg
Secondary structure (Cloverleaf model)
>FG091900303	Leu	CAA
                   t      Attt gtatgcagactaaggtacgagtactacaaaagctttttattggtgcttgttttttcataaaatttttttttttgttttgacgtctattacaaccctgccg
                     G - C
                     T - A
                     C - G
                     A - T
                     A - T
                     T + G
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TCTCGCAAGAGGC
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       T
                  T       G *
                    C A A
intron: position=38, length=27 (in A-loop)
TGTAAGCTTAGCAAGAGAAATCTGGCT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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