The detailed information of tRNA gene sequence


Sequence ID>W2110471272
Genome IDJAFCAR010000005
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesJannaschia sp. Os4 [JAFCAR]
Start position on genome 549478
End posion on genome 549552
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
caccccgcgt
tRNA gene sequence 
TGGGGTGTAGCCAAGCGGTAAGGCAGCGGTTTTTGGTACCGTGTACCGTAGGTTCGAATC
CTACCACCCCAGCCA
Downstream region at tRNA end position 
ttttcccctc
Secondary structure (Cloverleaf model)
>W2110471272	Gln	TTG
                   t      GCCA ttttcccctc
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      C     A C C G       G T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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