The detailed information of tRNA gene sequence


Sequence ID>W2110504092
Genome IDJAFISO010000027
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi [JAFISO]
Start position on genome 3551
End posion on genome 3461
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccgtaatttt
tRNA gene sequence 
GGAGAGATGGCAGAGTCTGGCTGAATGCGCTGCACTCGAAATGCAGTATATCCTCTGGGT
ATCGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gttatcactt
Secondary structure (Cloverleaf model)
>W2110504092	Ser	CGA
                   t      GCCA gttatcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    C T G A        G     TATATCCTCTGGGTATC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK