The detailed information of tRNA gene sequence


Sequence ID>W2110566768
Genome IDJAGQED010000002
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCollimonas antrihumi DSM 104040 [JAGQED]
Start position on genome 96640
End posion on genome 96729
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acgcctctct
tRNA gene sequence 
GGAAGTGTGGCCGAGTGGTTGAAGGCACTAGTCTTGAAAACTAGCGACGGTTTATCCCGT
TCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
aattactatt
Secondary structure (Cloverleaf model)
>W2110566768	Ser	TGA
                   t      GCCA aattactatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGACGGTTTATCCCGTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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