The detailed information of tRNA gene sequence


Sequence ID>W2110659350
Genome IDJAHXBH010000013
Search identical group
Phylum/ClassMyxococcota
SpeciesStigmatella hybrida DSM 14722 [JAHXBH]
Start position on genome 5286
End posion on genome 5384
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatcgcgcat
tRNA gene sequence 
GGTAGGGCCTCCGGATCTGGTGGCCGGCCCGGTCTTCAAAACCGGTGAGGGGCTGCGAGA
GCAGTCCCTGGCGAGTTCGATTCCCGTGCCCTACCGCCA
Downstream region at tRNA end position 
tgttttcctt
Secondary structure (Cloverleaf model)
>W2110659350	SeC	TCA
                   t      GCCA tgttttcctt
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T T
                    C     T G C C C     A
      C T A        T      + | |   |     G
    T       G G C C       G C G A G     C
    G       | | | |                 T T
    G       C C G G
      T G G        C     TGAGGGGCTGCGAGAGCAGTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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