The detailed information of tRNA gene sequence


Sequence ID>C201000978
Genome IDAP019547
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Nitrotoga sp. AM1P [AP019547]
Start position on genome 2844868
End posion on genome 2844776
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcggccttta
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGTACTCCCCTGCTAAGGGAGCGTAGGGTTTATAGCC
TTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cagcaacagt
Secondary structure (Cloverleaf model)
>C201000978	Ser	GCT
                   a      GCCA cagcaacagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | +                 T T
    T       A G G T
      C G A        A     CGTAGGGTTTATAGCCTTACC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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