The detailed information of tRNA gene sequence


Sequence ID>C201004104
Genome IDAP019797
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus AA3-38 [AP019797]
Start position on genome 8990
End posion on genome 9080
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gggcgcttgc
tRNA gene sequence 
GGAGAGGTGCCCGAGCGGTCGAAGGGGCACGCCTGGAGAGCGTGTGTACCGTTCACCGGT
ACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ggccgggttg
Secondary structure (Cloverleaf model)
>C201004104	Ser	GGA
                   c      GCCA ggccgggttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G T G G G     C
    G         | | |                 T T
    T       A G G G
      C G A        G     TGTACCGTTCACCGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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