The detailed information of tRNA gene sequence


Sequence ID>C201075164
Genome IDCP038852
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Pelagibacter giovannonii NP1 [CP038852]
Start position on genome 731225
End posion on genome 731136
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaagttaat
tRNA gene sequence 
GGAGAGATGGCTGAGGGGTTTAAGGTGCATGCTTGGAAAGTATGTGTATTGTTAAAAGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
atattattta
Secondary structure (Cloverleaf model)
>C201075164	Ser	GGA
                   t      GCCA atattattta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      G G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | +                 T T
    T       A G G T
      T T A        G     TGTATTGTTAAAAGTACC
                    C - G
                    A - T
                    T - A
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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