The detailed information of tRNA gene sequence


Sequence ID>C211000473
Genome IDAP018712
Search identical group
Phylum/ClassThermotogota
SpeciesTepiditoga spiralis sy52 [AP018712]
Start position on genome 923932
End posion on genome 923846
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttcgtagtt
tRNA gene sequence 
GGAGACGTAGTCTAATTGGTAAGGCGTCGGTCTTGAAAACCGATGAGGTAACCCCTCGTG
CGAGTTCGAGTCTCGCCGTCTCCGCCA
Downstream region at tRNA end position 
caaaccgccg
Secondary structure (Cloverleaf model)
>C211000473	Ser	TGA
                   t      GCCA caaaccgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C G C T C     A
      T A A        A      | | | | |     G
    T       T C T G       G C G A G     C
    G       | | + |                 T T
    G       A G G C
      T A          G     TGAGGTAACCCCTCGT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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