The detailed information of tRNA gene sequence


Sequence ID>C211038757
Genome IDCP031394
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema phagedenis Reiter [CP031394]
Start position on genome 2100413
End posion on genome 2100487
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaacgtctaT
tRNA gene sequence 
GGCGGTATAGCTCAGTTGGTAGAGCAAACGGCTCATATCCGTTAGGTCATAGGTTCAAGC
CCTATTGCCGCTAAaa
Downstream region at tRNA end position 
taaaggacac
Secondary structure (Cloverleaf model)
>C211038757	Met	CAT
                   T      AAaa taaaggacac
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          C G
                    T     T A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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