The detailed information of tRNA gene sequence


Sequence ID>C211052356
Genome IDCP040925
Search identical group
Phylum/ClassMycoplasmatota
Species'Echinacea purpurea' witches'-broom phytoplasma NCHU2014 [CP040925]
Start position on genome 112402
End posion on genome 112493
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atttttttat
tRNA gene sequence 
GGAGCAGTACTCAAGTGGCTATAAGAGGCATCTCTGCTAAGGATGTAGTTCAAGAAATTG
ATGCAAGGGTTCGAATCCCTTCTGCTCCGCCA
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>C211052356	Ser	GCT
                   t      GCCA tttttatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     T T C C C     A
    G T G A        A      | | | | |     G
  G         A C T C       A A G G G     C
  C           | | |                 T T
  T         A G A G
    A T A          G     TAGTTCAAGAAATTGATGC
                    C - G
                    A - T
                    T - A
                    C - G
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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