The detailed information of tRNA gene sequence


Sequence ID>W1520001508
Genome IDLCHM01000020
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Gottesmanbacteria bacterium GW2011_GWB1_44_11c bacterium GW2011_GWB1_44_11c [LCHM]
Start position on genome 4635
End posion on genome 4721
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaatatcaat
tRNA gene sequence 
GGAGAGGTGCAGGGAATGGCTATCCGGACAGTCTCGAAAACTGTTGTCCCGCAAGGGACG
TGTGGGTTCGACTCCCACCCTCTCCGCta
Downstream region at tRNA end position 
gtattaaaca
Secondary structure (Cloverleaf model)
>W1520001508	Ser	CGA
                   t      GCta gtattaaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     C A C C C     A
      A A G        G      | | | | |     G
    T       G G A C       G T G G G     C
    G       + |   |                 T T
    G       T C C G
      C T A        G     TGTCCCGCAAGGGACGT
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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