The detailed information of tRNA gene sequence


Sequence ID>W1520001540
Genome IDLCPJ01000004
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Gottesmanbacteria bacterium GW2011_GWA1_48_13 bacterium GW2011_GWA1_48_13 [LCPJ]
Start position on genome 27499
End posion on genome 27411
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtttgttcat
tRNA gene sequence 
GGAGGGGTGCAGGGAATGGCTATCCGGACAGTCTCGAAAACTGTTGTCTCCGTAAGGGGA
CTTGCGAGTTCGAGTCTCGCCCCCTCCGCag
Downstream region at tRNA end position 
attcaaaatt
Secondary structure (Cloverleaf model)
>W1520001540	Ser	CGA
                   t      GCag attcaaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G C T C     A
      A A G        G      | | | | |     G
    T       G G A C       G C G A G     C
    G       + |   |                 T T
    G       T C C G
      C T A        G     TGTCTCCGTAAGGGGACTT
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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