The detailed information of tRNA gene sequence


Sequence ID>W1530000448
Genome IDBBPX01000142
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. D2 [BBPX]
Start position on genome 23904
End posion on genome 23816
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgagtgttt
tRNA gene sequence 
GGAGTGGTGACCGAGTGGTTGAAGGTGGCTCCCCGCTAAGGAGTTATACCCCTAAAGGGT
ATCGGGGGTTCGAATCCCCCCTGCTCCGCgt
Downstream region at tRNA end position 
cggcggcaag
Secondary structure (Cloverleaf model)
>W1530000448	Ser	GCT
                   t      GCgt cggcggcaag
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G G G G G     C
    G         | | |                 T T
    T       A G G T
      T G A        G     TATACCCCTAAAGGGTATC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  C       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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