The detailed information of tRNA gene sequence


Sequence ID>W1530030034
Genome IDLCEF01000004
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Collierbacteria bacterium GW2011_GWA1_42_60 bacterium GW2011_GWA1_42_60 [LCEF]
Start position on genome 28703
End posion on genome 28790
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaacaggatt
tRNA gene sequence 
GGAGACGTCCAGTAGTGGTTTATCTGAACGGTTCGCTAAACCGTAGCTCGAAAGAGCCTC
GTGGGTTCGAATCCCACCGTCTCCGCCT
Downstream region at tRNA end position 
ccttttttat
Secondary structure (Cloverleaf model)
>W1530030034	Ser	GCT
                   t      GCCT ccttttttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T G A C       G T G G G     C
    G         | | |                 T T
    T       T C T G
      T T A        A     AGCTCGAAAGAGCCTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  C       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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