The detailed information of tRNA gene sequence


Sequence ID>W1530030803
Genome IDLCLN01000011
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC1_45_9 GW2011_GWC1_45_9 [LCLN]
Start position on genome 3166
End posion on genome 3255
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaatcaacac
tRNA gene sequence 
GGTGGGGTGACAGAGCGGTTTAATGTGCTGGTCCTGAAAACCAGAATGCCTGAAAGGGCA
TCGCGAGTTCGAATCTCGCCCCCACCGCCA
Downstream region at tRNA end position 
tccttttccg
Secondary structure (Cloverleaf model)
>W1530030803	Ser	TGA
                   c      GCCA tccttttccg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C T C     A
      C G A        G      | | | | |     G
    G       G A C A       G C G A G     C
    G         | | |                 T T
    T       A T G T
      T T A        G     AATGCCTGAAAGGGCATC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  C       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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