The detailed information of tRNA gene sequence


Sequence ID>W1510014419
Genome IDBBPW01000302
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. D11 [BBPW]
Start position on genome 160
End posion on genome 232
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttgccgatac
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGGAGAGCATTTGGGTCACATCCAAAGGGTCGGCGGTTCAAGC
CCGTCAGCGCCTAtag
Downstream region at tRNA end position 
aggcaaaaaa
Secondary structure (Cloverleaf model)
>W1510014419	Val	CAC
                   c      Atag aggcaaaaaa
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C G
                    T     C T G C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    G - C
                  G       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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