The detailed information of tRNA gene sequence


Sequence ID>W1510014438
Genome IDBBPX01000110
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. D2 [BBPX]
Start position on genome 3129
End posion on genome 3057
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
catgctaacc
tRNA gene sequence 
GGGGAATTAGCTCAGATGGTAGAGCGATAGGTTCGCAATCTATAGGTCGTGGGTTCGATT
CCCACATTCTCCAaaa
Downstream region at tRNA end position 
ccagccgctt
Secondary structure (Cloverleaf model)
>W1510014438	Ala	CGC
                   c      Aaaa ccagccgctt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T T
                    T     C A C C C     A
      A G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    A - T
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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